Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8530g00001 ATGATTATTACAACTAGAGATGCACGCCTTCTCAATTCACTTGGTGTTAAACACGTCTTCACCATGACAGAAATGGACGAAAACCAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTCGACAACCAAGTCCTAGAGAAGATTTTAGTGAACTCTCTAGAAATGTAGTTGCTTATTGCGGAGGATTACCTCTGGCACTTGAAGTCCTTGGATCTTACTTAACTGGGAGGACGGAACAAGAATGGAGAAGTGCACTATCAAAATTAGAGAAAATTCCCAACGATCAAGTRCAACAGAAACTGAGAATCAGCTACGATGGYTTAGARGATTATACRGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGATTGTGGGTTTTATGCTGATATTGGAATAGCTGTACTCATAGAGCGGAGCCTCGTAAAAGTTGAAAAGAAGAATAACAAGCTTCAAATTCATGATTTGCTACGGGACATGGGAAGAGCAATTGTTGGAGAAAGTTCAGCAAAAGAACCCGGAAAGCATAGTCGATTGTGGTTTCCTGATGATGTGGTGGAAGTTTTGACAAAAAATACTGGAACAGAAACTATAGAAGGATTGGTTTTGAAGTCACAAAGAGTTGACAAATTTTGTTTCAATACTAATTCTTTCAAGAAGATGAAGAAACTCAGACTTTTACAACTTGATTGTGTTGACCTCACTGGGGATTTTCGGTATCTTTCCAAACAACTTAGATGGGTCAATTGGCAACGATCTACCTTCAACTATATACCTAATGACTTTGACATGGGAAATCTCATTGCTTTTGAATTAAAGTATAGCAATGTTGAACAGGTTTGGAAGGAAAACAAGTTGTTGCAGAAGCTAAAAATTCTCAATCTTAGTCATTCCAAGCACTTGAAAAGCACCCCTGATTTTTCAAAATTACCGAACCTAGAAAAGCTCATTATGAAGGATTGTCAAAGTTTGTCTGAGGTGCACTCGTCCATTGGAGATCTCAAGAATATTCTTCTGATAAATTTGAAGGACTGTACAAATCTTGGCAATCTCCCTATAGAGATATATCAATTGGCATCAGTGAAAATTCTGATCCTTTCTGGTTGTTCAAATATTGACCAATTGGAAGAAGATATAGGGAAAATGAAATCCTTGACAACTATAGCTGCAAAAAATACTGGTGTCAAACAAGTGCCGGTTTCGATAGTTAGATCAAAAAGCATTA 1264 0.3695 MIITTRDARLLNSLGVKHVFTMTEMDENQSLELFSWHAFRQPSPREDFSELSRNVVAYCGGLPLALEVLGSYLTGRTEQEWRSALSKLEKIPNDQVQQKLRISYDGLEDYTEKDIFLDICCFFIGKNRADVTEILNDCGFYADIGIAVLIERSLVKVEKKNNKLQIHDLLRDMGRAIVGESSAKEPGKHSRLWFPDDVVEVLTKNTGTETIEGLVLKSQRVDKFCFNTNSFKKMKKLRLLQLDCVDLTGDFRYLSKQLRWVNWQRSTFNYIPNDFDMGNLIAFELKYSNVEQVWKENKLLQKLKILNLSHSKHLKSTPDFSKLPNLEKLIMKDCQSLSEVHSSIGDLKNILLINLKDCTNLGNLPIEIYQLASVKILILSGCSNIDQLEEDIGKMKSLTTIAAKNTGVKQVPVSIVRSKSI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8530g00001 421 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 392 IPR044974 GO:0006952
Trme8530g00001 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 119 IPR027417 -
Trme8530g00001 421 Gene3D - 24 108 IPR042197 -
Trme8530g00001 421 PRINTS Disease resistance protein signature 59 73 - -
Trme8530g00001 421 PRINTS Disease resistance protein signature 298 314 - -
Trme8530g00001 421 FunFam Disease resistance protein (TIR-NBS-LRR class) 26 108 - -
Trme8530g00001 421 Pfam NB-ARC domain 1 98 IPR002182 GO:0043531
Trme8530g00001 421 Gene3D Ribonuclease Inhibitor 200 418 IPR032675 -
Trme8530g00001 421 SUPERFAMILY L domain-like 166 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8530g00001 Trme-Chr8530 1 1615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8530g00001 1 415 WRKY Transcription Factor Family AT4G12020 31.555 2.21e-51 184