Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme85274g00001 TGTTCATCTGAGGTTCATTTTTCTGGATTTCATATGGAGGGATTAGAGGAAAGAAAAGCTGGAACTGAAAAACCGACCACTTCGGCGATTGACGAGTATAAACAACCTTTTGTTATAGGTGTTGCTGGGGGATCGGCATCTGGAAAGACAGCAGTATGTGATATGATTATTCAACAGCTTCATGATCAGCGGGTTGTACTTGTTAATCAGGTAATGAGTTGTTTCTAA 228 0.4035 CSSEVHFSGFHMEGLEERKAGTEKPTTSAIDEYKQPFVIGVAGGSASGKTAVCDMIIQQLHDQRVVLVNQVMSCF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme85274g00001 75 Gene3D - 9 70 IPR027417 -
Trme85274g00001 75 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 69 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme85274g00001 Trme-Chr85274 2 552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme85274g00001 2 69 PRT Gene Family AT4G26510 61.111 5.61e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme85274g00001 K00876 - gmx:100798205 127.872