Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8522g00001 ATGAGAGACTTTAAAGGAAGTGCTGATGATTTTGCTGTTGGAGGTACCGGGGTTGTCACAGGAGTGTCATGGCCTGTATTCAAATGGAGTGGCGGAAGAGATGATAAGTACTTTGCAAGGATGGGGAAAAATGTACTTTCTGTATATGAGACAGAAAATTTTTCTCTTGTTGACAAAAAATCCATAAAGGTTGAAAATATAATGGATTTCAGCTGGTCACCAACTGATCCAATCATTTCACTGTTTGTTCCCGAGACAGGAGGTGGTAACCAGCCAGCTAGGGTAAGTCTTGTTCAAATCCCCAGCAAAGAGGAACTCAGGCAAAAGAACCTTTTTAGTGTCAGTGACTGCAAGATGTACTGGCAGAGCAATGGGGATTACCTTGCTGTTAATGTAGATCGATATACCAAAACAAAGAAAAGCACTTACACAGGCTTTGAGCTTTTCCGTATAAAGGAACGTGACATACCCATTGAAGTTCTGGAGCTTGAGAATAAGAATGATAAGATCATTGCATTTGCTTGGGAGCCAAAGGGACATAGGTTTGCTGTTATTCACGGTGATATGCCTAAGCCTGATATTAGTATCTACTCTATGCGGACTGCTCAGAACACTGGCCGTGTTTCAAAGCTCACTACTCTGAAAGGCAAGCAGGCAAATGCTTTGTTTTGGTCACCTGCAGGTCGCTTCATTGTACTAGCAGGGTTGAAAAGTTTGAACGGACTGTTGGAATTTTACAATGTTGATGATCTCGAAACCATGGCTAATACTGAACATTTTTATGCAACTGATGTTGAATGGGATCCAACTGGAAGGTATGTTGCAACTGCTGTGACTCATCATGATATGGAAAATGGATTCAATATATGGTCTTTCAATGGCAAACATCTGTATCGGATATTGAAGGATAGCTTATATCAGTTCTTATGGAGACCAAGACCAGCATCTTTCTTGACTGCTGAGAAAGAGGAAGAGATTGCAAAGAACTTGAAGAAGTATAGTAAGAAATATGAAGCTGAAGATCAAGATGTTTCATTGCTGCTGAGTGAGCAGGAGCAAGAGAAGCGCAGGATCTTGAAAGAAGATTGGGAGAAATGGGTTAATCAATGGAAGCAGTTGCATGAAGAAGAGAAGTCAAAGAGGCAAGA 1148 0.4103 MRDFKGSADDFAVGGTGVVTGVSWPVFKWSGGRDDKYFARMGKNVLSVYETENFSLVDKKSIKVENIMDFSWSPTDPIISLFVPETGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDMPKPDISIYSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKSLNGLLEFYNVDDLETMANTEHFYATDVEWDPTGRYVATAVTHHDMENGFNIWSFNGKHLYRILKDSLYQFLWRPRPASFLTAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEQEKRRILKEDWEKWVNQWKQLHEEEKSKRQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8522g00001 382 Gene3D - 32 328 IPR015943 GO:0005515
Trme8522g00001 382 Coils Coil 320 340 - -
Trme8522g00001 382 FunFam Eukaryotic translation initiation factor 3 subunit B 114 328 - -
Trme8522g00001 382 SUPERFAMILY DPP6 N-terminal domain-like 28 310 - -
Trme8522g00001 382 Pfam Eukaryotic translation initiation factor eIF2A 109 308 IPR013979 -
Trme8522g00001 382 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 1 382 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Trme8522g00001 382 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 8 379 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8522g00001 1 382 Eukaryotic Initiation Factors Gene Family AT5G27640 80.157 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8522g00001 K03253 - qsa:O6P43_015800 687.182