Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme85207g00001 ATGTTAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAAACTCTAAACGAGGGAGGAGAGGATGAGACCCCGTTGCAGGTGAAATTGAACGGAGTTGCTACTATTATTGGTAAAATTGGTTTGGGTTTTGCCATTGTGACATTTTTGGTATTGACTATAAGGTTTCTTGTCGAAAAAGTACTTCATGGTGAGATTAGTAATTGGTCTTCAAATGATGCAACGAAGCTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTTGTTGCGGTTCCTGAAGGGTTACCACTGGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACATGGCACTCGTGAGACATCTTTCTGCTTGTGAGACTATGGGTTCAGCCAGTTGCATTTGCACAGATAAGACAGGGACATTGACCACTAACCATATGGTGGTTAACAAAATATGGATATGTGAAAAAACCACCCAGTTGAAAGGTAATGAGAGTGCAGATGAACTGAAAACGAACATTAATGAAGGAGTTATAAGCATCCTTTCACAGGCTATATTTCAAAATACTTCTGCTGAAGTGGTTAAGGATAAAAATGGAAAG 609 0.3924 MLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLGFAIVTFLVLTIRFLVEKVLHGEISNWSSNDATKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDMALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICEKTTQLKGNESADELKTNINEGVISILSQAIFQNTSAEVVKDKNGK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme85207g00001 203 NCBIfam HAD-IC family P-type ATPase 75 161 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme85207g00001 203 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 192 IPR023298 -
Trme85207g00001 203 Pfam E1-E2 ATPase 2 115 - -
Trme85207g00001 203 ProSitePatterns E1-E2 ATPases phosphorylation site. 139 145 IPR018303 -
Trme85207g00001 203 PANTHER CATION TRANSPORTING ATPASE 1 198 - -
Trme85207g00001 203 Gene3D - 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme85207g00001 Trme-Chr85207 1 609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme85207g00001 1 203 Primary Pumps ATPases AT3G57330 75.862 4.64e-102 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme85207g00001 K01537 - gmx:100783489 341.658