Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8502g00001 ATGCAGGAGGAGAAAGATGAGCCGCTGATTTCAGAGATGAGTTGGAGAGAAGAGCTTCCAGAGGCTCTTGCTCTTGCAGGATTTGTAGTTCTAAATTCCAGGAATGAGAGTAAGGAAGTCAAGGATATAGTTGAAAATGTTACACATTTGGTTGACATGACAGACTTGTATGTTGCTGATAATCCTGTTGGAGTCAACTCTCGAATACAAGATATGATTCAACGGTTAAACATTCAACAGTCAAATGATATTATACTACTACAGTTGTGGGGCATGGGCGGAATTGGTAAAACCACAATCGCGGAAAATATGGATTCCAAGGATCATGACAAGTCAATGGACAGTCTTATGCTAGACCAAAGGAGTTCCGATATGGTGAAGAAATTACTTGCCTTGATTAAGGCAGTCAATGAAGCTGACGAACAAGCACCTGAAGGAGGCCATGAACCATCAATTGAAGAACTACT 467 0.4111 MQEEKDEPLISEMSWREELPEALALAGFVVLNSRNESKEVKDIVENVTHLVDMTDLYVADNPVGVNSRIQDMIQRLNIQQSNDIILLQLWGMGGIGKTTIAENMDSKDHDKSMDSLMLDQRSSDMVKKLLALIKAVNEADEQAPEGGHEPSIEELL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8502g00001 156 Gene3D - 47 155 IPR027417 -
Trme8502g00001 156 Pfam NB-ARC domain 68 107 IPR002182 GO:0043531
Trme8502g00001 156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 107 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8502g00001 Trme-Chr8502 608 1815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8502g00001 5 107 WRKY Transcription Factor Family AT4G12020 30.097 1.06e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8502g00001 - - cam:101512894 145.206