Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme85029g00001 TATCTTGGTGCAATTGTGAAAGAGACTTTCCGGCGTCATCCTCCGAGTCATTTTGTGCTTTCTCACGCGGCTACGGAGGAGACAAAGCTTGGTGGATACACTGTGCCAGCGGATGCGAGTGTTGAGTTTTACACWGCTTGGTTGTCTGAGAATCCKGATATGTGGAAGGATCCGGATGAGTTTCGACCCGAGAGGTTTTTAAATGGGGATGGAGTGGATGTAGATATTACGGGAACTAAAGAGGTGAAGATGATGCCGTTTGGTGCAGGGAGGAGGATTTGTCCGGCATGGACATTGGGGACTTTGCATATAAACATGATGTTGGCCAAAATGGTGCTTGCTTATAGGTGGTTGCCGGTTCCGAATTCCCCACCCGACCCGACTGAGACATTTGCTTTCACTGTTGTCATGAAGAATCCTCTCAAGGCTGTTATTGTTCCTAGATCCATTTAA 453 0.4746 YLGAIVKETFRRHPPSHFVLSHAATEETKLGGYTVPADASVEFYTAWLSENPDMWKDPDEFRPERFLNGDGVDVDITGTKEVKMMPFGAGRRICPAWTLGTLHINMMLAKMVLAYRWLPVPNSPPDPTETFAFTVVMKNPLKAVIVPRSI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme85029g00001 150 PANTHER CYTOCHROME P450 98A9 1 148 - -
Trme85029g00001 150 Pfam Cytochrome P450 1 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 SUPERFAMILY Cytochrome P450 1 148 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 Gene3D Cytochrome P450 1 150 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 PRINTS E-class P450 group I signature 94 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 PRINTS E-class P450 group I signature 44 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 PRINTS E-class P450 group I signature 84 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 PRINTS E-class P450 group I signature 3 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme85029g00001 150 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 87 96 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme85029g00001 Trme-Chr85029 298 750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme85029g00001 1 149 Cytochrome P450 AT1G11600 70.667 1.66e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme85029g00001 K21995 - qsa:O6P43_011895 278.87