Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84952g00001 ATGGAAAATATGGCAATAGAAACAGATTTGACAAAGTTGGATTATCTCCAAGCCATTATCAAGGAAACATTGCGTTTGTACCCAGCCTCACCACTCAATGTTCCTCATCAATCCATTGAAGATTGTATTGTTGGTGGATACCATGTGCCTGCTGGGACACGTCTTTTAACCAATGTTTCGAAACTTCAACGAGATCCAATGTTTTACATGGATCCGTTGGAGTTTCGACCGGAGAGATTTCTCACAACTCACAAGGATGTTGATGTCAAGGGTCAACATTTTGAGTTGATTCCATTTGGTNNNNNNNNNNTNNNNNNNNNNGGAATCTCATTTGGTCTTCAACTTATGCAAATAACACTCGCTACTTTGTTGCATGGGTTTGATATAGTGACTCCAAATGAAGGACCAATTGATATGGCTGAACAAAATGGACTCACTACTATCAAAGCCTCTCCGGTTGAAGTCATTCTCACTCCAC 478 0.3891 MENMAIETDLTKLDYLQAIIKETLRLYPASPLNVPHQSIEDCIVGGYHVPAGTRLLTNVSKLQRDPMFYMDPLEFRPERFLTTHKDVDVKGQHFELIPFGXXXXXXXGISFGLQLMQITLATLLHGFDIVTPNEGPIDMAEQNGLTTIKASPVEVILTP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84952g00001 159 Gene3D Cytochrome P450 3 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme84952g00001 159 SUPERFAMILY Cytochrome P450 7 159 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme84952g00001 159 PANTHER CYTOCHROME P450 82C3-RELATED 7 159 - -
Trme84952g00001 159 PRINTS E-class P450 group I signature 17 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme84952g00001 159 PRINTS E-class P450 group I signature 106 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme84952g00001 159 PRINTS E-class P450 group I signature 58 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme84952g00001 159 Pfam Cytochrome P450 8 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84952g00001 Trme-Chr84952 144 621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84952g00001 7 159 Cytochrome P450 AT4G31940 54.545 7.88e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84952g00001 - - gmx:100787630 236.884