Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme849335g00001 GGTTATCGCGCTCCTGAGGTGATTGAAACCGGTAATCACTCTCATAAATCAGATGTTTACAGCTTTGGTGTCCTCCTTCTCGAATTGCTTACAGGTAAAGCGCCTCTACAATCTCGTGGATACAATGATATGATTGATCTCCCTAGTTGGGTTCGGTCGGTCATCCGGGAGGAATGGACAATCGAGGTTTTCGATGATGAGCTAATGAACGAAAACATGGAAGAAGAAATGGTGC 235 0.4511 GYRAPEVIETGNHSHKSDVYSFGVLLLELLTGKAPLQSRGYNDMIDLPSWVRSVIREEWTIEVFDDELMNENMEEEMV 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme849335g00001 78 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Trme849335g00001 78 SUPERFAMILY Protein kinase-like (PK-like) 1 77 IPR011009 -
Trme849335g00001 78 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 72 - -
Trme849335g00001 78 ProSiteProfiles Protein kinase domain profile. 1 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme849335g00001 78 Pfam Protein kinase domain 2 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme849335g00001 Trme-Chr849335 2 236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme849335g00001 1 78 Receptor kinase-like Gene Family AT5G58300 72.152 3.47e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme849335g00001 Pkinase 2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme849335g00001 - - pvy:116105820 116.316