Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme849095g00001 ATGACTGCGATAGAAGAAATGGCTGGTATGGATGTTCTTTGCAGCGACAAAACAGGAACACTTACTCTTAACAAATTGAGTGTTGATAGAAACTTGATTGAGGTGTTTATAAAGGGTGTGGATAAGGAACATGTGATCCTTCTTGCTGCTAGGGCTGCTAGGACTGAAAATCAGGATGCTATAGATTCTGCTATCGTT 198 0.404 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFIKGVDKEHVILLAARAARTENQDAIDSAIV 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme849095g00001 66 PANTHER CALCIUM-TRANSPORTING ATPASE 1 66 - -
Trme849095g00001 66 SUPERFAMILY HAD-like 2 26 IPR036412 -
Trme849095g00001 66 ProSitePatterns E1-E2 ATPases phosphorylation site. 16 22 IPR018303 -
Trme849095g00001 66 FunFam Phospholipid-transporting ATPase IC 11 23 - -
Trme849095g00001 66 Gene3D - 26 66 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme849095g00001 Trme-Chr849095 1 198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme849095g00001 1 66 Primary Pumps ATPases AT2G24520 84.848 8.09e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme849095g00001 K01535 - cave:132189285 123.25