Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8489g00001 CAGATTGTATATGACAAAGATTCATTCAAAAATGATGATTTTATGGGAGAGGCTGAAATAGATATTCAACCACTTGTTTCAGCAGCAAAAGCATATGAGAAATCTTCAATCAATGAGTCAATGCAGCTTGGAAAATGGGTAGCAAGTGGTGATAACACACTTGTGAAAGATGGAATAATCTCACTTGAAGAAGGAAAAGTGAGACAAGAAATCTCATTGAGGCTACAACATGTTGAGAGAGGTGTGCTTGAAATTGAGCTTGAATGTGTTCCTCTTACTCAATAG 285 0.3649 QIVYDKDSFKNDDFMGEAEIDIQPLVSAAKAYEKSSINESMQLGKWVASGDNTLVKDGIISLEEGKVRQEISLRLQHVERGVLEIELECVPLTQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8489g00001 94 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 81 IPR035892 -
Trme8489g00001 94 Gene3D C2 domain 2 93 IPR035892 -
Trme8489g00001 94 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 3 94 IPR044518 GO:0005096|GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8489g00001 Trme-Chr8489 2 286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8489g00001 3 94 C2H2 Transcription Factor Family AT4G21160 52.174 1.13e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8489g00001 K12486 - gmx:100799376 173.326