Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84856g00001 ATGTGGCTTCCCTCGCAGGCACTCCTTGTTCCTTTCGAGAACCGAACTGCTCAGGCTGTTGCGTGGGCTAGTCTGAAACATCTACCAGTGCCGCAACCAATGCCCTGCAGTGATAATTGTGGTGTGAGCATCAATTGGCATTTACTTACAGATTATAATAAAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAGACTAATTTTGCAGACTGGTTTGCTGCTGTGCAAATGGACAAAGCTGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAAGTTCCTTAGAGATAGACGGCGTGAATAATACGATAATAATGCAAGGTTTGGAGGGATTGAACTACCTTGTTGGAGAAACAGATGGAGCTGACCCTCGGAGAGATCCTAGAGTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNGGGTTCCCCACTAAAGTTTTCTTCAATGGGGAAGAATGCTCTCTTCCTTCTGTACTTCCAACCAGTAGTGCTTCCAGGAAGGGATTTCCCTATGCTACTTTGATGCTTCTACCATTGTTGCTATTTGTCTTCATGTTGTAA 609 0.3924 MWLPSQALLVPFENRTAQAVAWASLKHLPVPQPMPCSDNCGVSINWHLLTDYNKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNASSLEIDGVNNTIIMQGLEGLNYLVGETDGADPRRDPRVXXXXXXXXXXXXXXXXXXXXXXXXGFPTKVFFNGEECSLPSVLPTSSASRKGFPYATLMLLPLLLFVFML 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84856g00001 202 PANTHER COBRA-LIKE PROTEIN 7 1 201 - -
Trme84856g00001 202 Coils Coil 132 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84856g00001 Trme-Chr84856 4 612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84856g00001 1 183 COBRA Gene Family AT4G16120 60.656 3.04e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84856g00001 - - gmx:100814396 287.73