Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84817g00001 ATGGAGCATAAGAAGAAGCTTAAGCGGGAGTGTGGAATTGAGCCCTGGACCTTCACTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCATCAAGTGCGAAATCTGAAC 120 0.475 MEHKKKLKRECGIEPWTFTQKLGDAVFIPAGCPHQVRNLN 40
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84817g00001 40 ProSiteProfiles JmjC domain profile. 1 40 IPR003347 -
Trme84817g00001 40 SUPERFAMILY Clavaminate synthase-like 3 39 - -
Trme84817g00001 40 Gene3D Cupin 1 40 - -
Trme84817g00001 40 Pfam JmjC domain, hydroxylase 5 39 IPR003347 -
Trme84817g00001 40 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 39 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84817g00001 Trme-Chr84817 281 502 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Trme84817g00001 JmjC 7.6e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84817g00001 K15601 - gmx:100780803 82.8037