Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84792g00001 GCGTTGAGGAAGAGCTTTAGCGAAAAATTTAGTGACCAACATGGTACTAGGCCACCTGTATCACCGCCTATTTGCAGACATGAAAGATCTCACTCCAATGGATTTTCTGGTTCTGGAATTTTAGACGATACTTTATCTTCTGGGAAAATAAAGTTTCTTTGCAGCTTCGGTGGAAAAATATTACCAAGGCCCGGTGATAGTAAACTCAGATATGTTGGCGGAGAAACCCACATTATATCTATCCGAAAGGATATTTTATGGGAAGAGCTTATGAACAAGACTTTAGATCTTCAAAATATGATAGAGGAATATCATGGACTTGAAAGTCACGAAGGTTCTCAGAAACTTCGAATATTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCGTCTACCGAGGCAAACACCGTTCTGCAGAATGATCCTGATTACCAATACGTTGTTGCTTTAAACGGCGTAATAGACCCTAGTCCTAAGAAAAACACCGGTGGACAGAGTTTGATAAACGAAGCAAATCAGCCAGTGACAACTTTCAATTTTACTCCAATAATTGTGGCTTCTCCTTTGGAGACCAGGGACGGTAATAAACGTATTCATGCTTTAAATCCAGATGGAATTTTGAATGATCCCTTAAATCTTCAAAGTGCATTGCGAATTTCTCCTACT 666 0.3934 ALRKSFSEKFSDQHGTRPPVSPPICRHERSHSNGFSGSGILDDTLSSGKIKFLCSFGGKILPRPGDSKLRYVGGETHIISIRKDILWEELMNKTLDLQNMIEEYHGLESHEGSQKLRIFLVPLGESEETSSTEANTVLQNDPDYQYVVALNGVIDPSPKKNTGGQSLINEANQPVTTFNFTPIIVASPLETRDGNKRIHALNPDGILNDPLNLQSALRISPT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84792g00001 222 SUPERFAMILY CAD & PB1 domains 66 127 - -
Trme84792g00001 222 PANTHER OS05G0427100 PROTEIN-RELATED 33 94 - -
Trme84792g00001 222 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84792g00001 Trme-Chr84792 2 751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84792g00001 47 162 MAP Kinase Kinase Kinase AT1G79570 48.630 1.00e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84792g00001 - - gmx:100790135 253.447