Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84708g00001 ATGGAGCTAGCTTTGAGCTTAGGAGACACACCAAAACCATTTTCTTTGTTTGAAAACCCCAACAAAGGTTTCTCCATAGTACTTGAACAAGCTCAAAAATCCTTAGATGAAAAAAGAGGTTCTTCAGATCCACCAATTCAGCTAAACCTTCTTCCTTCAACACCGGTTCATCCTTCTCCTCATCAAATTCCTTGGCTCAACCATGCACTGGGTGTGGAACCGGCGAGGGTGACTAATGCAAACCGATTCCGGTTGGCGTCCGTGGAAGATACTACGGACGAGGGAGCTGCGGTTTCATCTCCGAATAGCGCAGCGTCATCTTTTCGGATGGATTTCTCTATCATGAATGGTAATGGTGATGCTAGAAACAATAGCCGTGAGGGGGGTGTCGATAGCGATGATGAAGAAAATGGATCCACTAGGAAGAAACTCAGACTATCTAAAGAGCAATCAGCTTTTCTTGAAGAAACTTTCAAAGAACACACCACTCTCAATCCT 498 0.4458 MELALSLGDTPKPFSLFENPNKGFSIVLEQAQKSLDEKRGSSDPPIQLNLLPSTPVHPSPHQIPWLNHALGVEPARVTNANRFRLASVEDTTDEGAAVSSPNSAASSFRMDFSIMNGNGDARNNSREGGVDSDDEENGSTRKKLRLSKEQSAFLEETFKEHTTLNP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84708g00001 166 MobiDBLite consensus disorder prediction 115 166 - -
Trme84708g00001 166 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 31 166 - -
Trme84708g00001 166 MobiDBLite consensus disorder prediction 126 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84708g00001 Trme-Chr84708 17 595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84708g00001 1 166 Homeobox Transcription Factor Family AT5G06710 35.268 3.05e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84708g00001 K09338 - gmx:100810885 166.392