Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84707g00001 GTCTTGAAAATGGAGAAAGAGGTTCTAAATCTTCTGCATTTCCAATTAGCTGTTCCTACAATCAAAACATTTCTCAGGAGGTTCATTGTTGTAGCACAATCTTCTTTCAAGGTTGTTTATGATGAACTGGAATTCATTGCAAATTATTTAGGAGAACTTGCTCTTATTGAATACAGCTTCTTGCAGTTTCGACCTTCCAAGATAGCTGCATCTGCGGTTTTTCTTGGCAGATGGACCCTCGACCAGTCAGAACATCCATGGGTCTGA 267 0.397 VLKMEKEVLNLLHFQLAVPTIKTFLRRFIVVAQSSFKVVYDELEFIANYLGELALIEYSFLQFRPSKIAASAVFLGRWTLDQSEHPWV 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84707g00001 88 FunFam Cyclin A1 6 88 - -
Trme84707g00001 88 SUPERFAMILY Cyclin-like 18 87 IPR036915 -
Trme84707g00001 88 Pfam Cyclin, C-terminal domain 19 85 IPR004367 -
Trme84707g00001 88 Gene3D - 6 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84707g00001 Trme-Chr84707 70 743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84707g00001 1 88 Core Cell Cycle Gene Families AT5G11300 69.318 1.49e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84707g00001 K06627 - gmx:100805701 141.354