Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84703g00001 ATGGAGATAGAAATAGATTCAGTTTCTTCACCTTCCAAGGTTAAAGAAATCGACGGCCTCCTCGCGGACGTCGGTTACAAAGTTAAGTCATCTGAGCTACATCAAGTAGCTCAGAACATCGAACGGTTGGAGAACGTAATCGTGAATTCATCGTCAAGCGACATTTCTCAATTCGCTTCCGATACAGTTCACTACGATCCCTCGGACATTGGCAATTGGGTGGACAATCTCCTCTCGGAGTTCGACCACACCAATTCTTTACCCTACGATTTCTCTCAACTGCCACTGCCAGATCTCGCACAAGATCAACACCAGCACCACCACCACCAATTAAAGGTGGTTACCACCGTCGAAGAAGACTCAGCGATAAAGCTTGTTCACACGCTGATGACGTGTGCGGATTCCTTGCAACGTGGCAACATACAATTGGCTGGCTCGTTAATCGAAGGCATGCAAGGTTTGTTAGCAAACATGAACACCAACTCCGGCATCGGAAAAGTCGCCGGATACTTCATCGACGCTTTAAACCGCCGCATCTTCGGTCAAAACAATATCATCCATATCGAGAACGATGTTCTTTACCATCACTACTACGAAGC 599 0.4691 MEIEIDSVSSPSKVKEIDGLLADVGYKVKSSELHQVAQNIERLENVIVNSSSSDISQFASDTVHYDPSDIGNWVDNLLSEFDHTNSLPYDFSQLPLPDLAQDQHQHHHHQLKVVTTVEEDSAIKLVHTLMTCADSLQRGNIQLAGSLIEGMQGLLANMNTNSGIGKVAGYFIDALNRRIFGQNNIIHIENDVLYHHYYEA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84703g00001 200 Gene3D - 16 81 IPR038088 -
Trme84703g00001 200 ProSiteProfiles GRAS family profile. 116 200 IPR005202 -
Trme84703g00001 200 FunFam DELLA protein GAI 16 81 - -
Trme84703g00001 200 SMART DELLA_2 18 91 - -
Trme84703g00001 200 Pfam Transcriptional regulator DELLA protein N terminal 18 85 IPR021914 -
Trme84703g00001 200 Coils Coil 26 46 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84703g00001 17 199 GRAS Transcription Factor Family AT1G14920 32.579 7.13e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme84703g00001 GRAS 4.8e-06 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84703g00001 K14494 - gmx:100805968 217.624