Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84678g00001 ATGGCGGATGTTATGGTAATGAAAGAGATTGAAGACAAAGCCTCGCTTCTTGGAATCGATCTATCTACCATTGATCTTGATTCCATTCACCTCCCACCGGGTGACGACTGTGGAATCATCAGTGATGATGAGAATGTTCTTCAAGAGGAAAATTCTGGTTCGTTTGATACTGGTTTTGGGAACATTATAGTAGTGGACAATCTTCCCGTTGTTCCGAAGGAAAAGTTTGAGAAGCTTGAAGGTGTTGTTCGTAAAATTTACAGTCAGATTGGTGTTATCAAGGATGGTGGTCTCTGGATGCCTGTTGATCCTGCCACCGGAAAGTCCTTAGGTTACTGCTTTATTGAGTACAATACTCCTCAGATGAACGGTGTTCTGCTATTCAATTTGATGAGGTTAAATTGGATGGTTATAGCAGGAAGCTGA 426 0.4178 MADVMVMKEIEDKASLLGIDLSTIDLDSIHLPPGDDCGIISDDENVLQEENSGSFDTGFGNIIVVDNLPVVPKEKFEKLEGVVRKIYSQIGVIKDGGLWMPVDPATGKSLGYCFIEYNTPQMNGVLLFNLMRLNWMVIAGS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84678g00001 141 FunFam Eukaryotic translation initiation factor 3 subunit B 56 128 - -
Trme84678g00001 141 Gene3D - 60 125 IPR012677 -
Trme84678g00001 141 SUPERFAMILY RNA-binding domain, RBD 59 128 IPR035979 GO:0003676
Trme84678g00001 141 CDD RRM_eIF3B 60 122 IPR034363 -
Trme84678g00001 141 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 25 122 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84678g00001 Trme-Chr84678 94 700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84678g00001 5 121 Eukaryotic Initiation Factors Gene Family AT5G27640 69.231 1.27e-51 172