Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8464g00001 AACCGCGACTCTCAGGGTTTGGTTCCGGTTACGGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGTGATGAAAAGTCCAATTTCTCAATCAACGGTGTAGATCTGACAAATGTGACTTTGGTTGGAATAGTGCATGAAAAAGCTGAGAGGAACACTGATGTTAATTTTGTTTTGGATGATGGAACTGGACGGATCACGTGTAGAAGATGGATCAATGAGACTTTTGACACGAAGGAAATGGAGGAAGTATTGAATGGAAAGTATGTTCGTGTTTATGGGCACTTGAAAAGCTTTCAAGGTGTAAGGCAGCTTACTGCCTTCTCTGTCAGGCATGTTTGCCGGACCCATTCTTTATGTTTATAA 363 0.4187 NRDSQGLVPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGIVHEKAERNTDVNFVLDDGTGRITCRRWINETFDTKEMEEVLNGKYVRVYGHLKSFQGVRQLTAFSVRHVCRTHSLCL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8464g00001 120 CDD RPA2_DBD_D 37 112 - -
Trme8464g00001 120 Pfam OB-fold nucleic acid binding domain 38 109 IPR004365 GO:0003676
Trme8464g00001 120 Gene3D - 1 120 IPR012340 -
Trme8464g00001 120 FunFam replication protein A 32 kDa subunit A-like 1 118 - -
Trme8464g00001 120 SUPERFAMILY Nucleic acid-binding proteins 7 112 IPR012340 -
Trme8464g00001 120 PANTHER REPLICATION PROTEIN A-RELATED 2 112 IPR040260 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8464g00001 1 112 Core DNA Replication Machinery Family AT2G24490 62.832 2.31e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8464g00001 K10739 - gmx:100802512 188.348