Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8457g00001 ATGGATACCACACTTTCCTTTTCGGGATTTTTTAGCAGTGGCAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCATTTACCGGTGATGTTGAAGCTGTCGATCCAAAAACCAATTTGCACTATAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAACGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCGCTTCAAAACTTTACTACCTGCAGCAGCTAAAGTTAAATGTGTCTCAGATGCTGGTTACTTTATCAATGTAAAGTCCGTCTCTGGATCACAACACATTGAACAATTCTACAGTCAAGTTGTTCAAACTCATGGCTCAGCAAAGAATTTGCCTTCATCTTGCACTTCAAGACTCCCACCAGGGCTGTGTTTTTTCCCGGAAAACGTGGCCGCACAAATCAGGACTCCGATCTTCTTTGTAAATGCAGCCTATGATTCATGGCAG 543 0.4015 MDTTLSFSGFFSSGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPAAAKVKCVSDAGYFINVKSVSGSQHIEQFYSQVVQTHGSAKNLPSSCTSRLPPGLCFFPENVAAQIRTPIFFVNAAYDSWQ 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8457g00001 181 Pfam Pectinacetylesterase 1 181 IPR004963 GO:0016787
Trme8457g00001 181 PANTHER NOTUM-RELATED 1 181 IPR004963 GO:0016787
Trme8457g00001 181 SUPERFAMILY alpha/beta-Hydrolases 18 180 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8457g00001 Trme-Chr8457 327 1748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8457g00001 1 181 Carbohydrate Esterase AT4G19420 65.746 6.05e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8457g00001 K19882 - gmx:100781246 318.161