Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8453g00001 GGGACGCCAGATTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCAATAATGTACGAAATGCTGGTTGGTTACCCTCCATTTTACTCTGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAACCATTTGAGATTTCCAGAAGATCCCCATGTGACATTTGAGGCTAAGGATCTAATCTACAGATTGCTGTGTGATGTTGATAATAGGTTAGGTACTCGAGGGGCACAAGAAATCAAGGCTCATCCATGGTTCAAGGGTGTAGAGTGGGATAAACTATATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAACTGGATACACAAAACTTCATGAAGTTTGATGAGGTATAA 402 0.4104 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDPHVTFEAKDLIYRLLCDVDNRLGTRGAQEIKAHPWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8453g00001 133 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Trme8453g00001 133 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8453g00001 133 FunFam Non-specific serine/threonine protein kinase 1 117 - -
Trme8453g00001 133 FunFam Non-specific serine/threonine protein kinase 118 128 - -
Trme8453g00001 133 ProSiteProfiles AGC-kinase C-terminal domain profile. 100 133 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme8453g00001 133 SUPERFAMILY Protein kinase-like (PK-like) 1 129 IPR011009 -
Trme8453g00001 133 Pfam Protein kinase domain 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8453g00001 133 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 130 - -
Trme8453g00001 133 Gene3D Phosphorylase Kinase; domain 1 118 128 - -
Trme8453g00001 133 SMART serkin_6 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8453g00001 Trme-Chr8453 348 1619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8453g00001 1 133 AGC Kinase Gene Family AT4G33080 84.328 1.05e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme8453g00001 Pkinase 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8453g00001 K08790 - gmx:100815717 275.789