LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme8445g00001	AACTGTTTTGAGAATAACCAGCCACTAGATCATACGTTTAAAGGCTCTGCTTCATCTCTGTTCAACAGTCCTTTAAATAACTCAGACATGACTCAGTTGGATTTTCATCCATTCGGTTTAAATCAAGATATGGATCACAATGCTGTAGGTCACAACTCTGATTTGCTTGGTCGGTTTAATTTGTATCAGGACCAAAGCCTCGGGCACGACACAGAAATAAAAAACTCAGAGTCAACTCAATTTAGTTTCGAAGAAGGCATTGATTGTTCTCAATTTTTCGGAGATAATGACACCACACAATTTGGAGACAATCTTATACCTAACATTCTTCCAAATATCTGCCCCCCACCTTCTGCTTTCCTATCCCCAAAATGTGCACTGTGGGACTGTTTCAGGCCTGCTCAAGAAGGGTGCCAGGACTACTGTAGTAGTTATCATGAGCTTTTGGCAAAAAATGAAGGTCTCCCTGGCATGACTCCAATTTTGCGACCTCGTGGCATTGATATAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCTAAGACACTGGGAAAAGAAGTGGGCATCCCTAAGTGTGAAGGTGCTGCTTCAATGAAAGCCCCCTGGAATGCTTCAGAGTTCTTTGACATTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTGTTCTTTGACAAGCCTAGAAGGGCGTTCGACAGTGGAACTAGGAAACAGAGATCACTCCCTGATTACCATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACACGGGGGACAAAAGAGATCCTATTACATGGACCCCCAGCCTCCTAATCGTGATTGGCATTTGTACGAGTATGAGATCAATAGCCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGT	902	0.4335	NCFENNQPLDHTFKGSASSLFNSPLNNSDMTQLDFHPFGLNQDMDHNAVGHNSDLLGRFNLYQDQSLGHDTEIKNSESTQFSFEEGIDCSQFFGDNDTTQFGDNLIPNILPNICPPPSAFLSPKCALWDCFRPAQEGCQDYCSSYHELLAKNEGLPGMTPILRPRGIDIKDGPLFAAVLAKTLGKEVGIPKCEGAASMKAPWNASEFFDISFLEGETVREWLFFDKPRRAFDSGTRKQRSLPDYHGRGWHESRKQVMKEHGGQKRSYYMDPQPPNRDWHLYEYEINSHDGCALYRLELKLV	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme8445g00001	301	PANTHER	TRANSCRIPTION FACTOR VOZ1	11	301	IPR039277	GO:0006355\|GO:0048578

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme8445g00001	Trme-Chr8445	728	1819	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme8445g00001	106	301	VOZ-9 Transcription Factor Family	AT1G28520	72.864	6.26e-102	305

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Trme8445g00001		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme8445g00001	-		-	vvo:131602353	530.791