Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84450g00001 TTGACAGACTTTGGACTCTCAAAAGTTGGTCTCATCAATAGCACGGATGATTTATCAGCACCCTCATCTTTCACTAACGGTTTTTTAGGCGATGATGAACCAAAATCTCCACATGTTCCGAAAAGGGAAGCACGTCAACAACAAGGAGTAGTTGGCACTCCAGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTTTGCAGTTTATCTGCTGA 222 0.4369 MTDFGLSKVGLINSTDDLSAPSSFTNGFLGDDEPKSPHVPKREARQQQGVVGTPDYLAPEILLGMGHGLQFIC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84450g00001 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme84450g00001 73 Gene3D Transferase(Phosphotransferase) domain 1 1 71 - -
Trme84450g00001 73 SUPERFAMILY Protein kinase-like (PK-like) 2 68 IPR011009 -
Trme84450g00001 73 MobiDBLite consensus disorder prediction 17 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84450g00001 Trme-Chr84450 333 554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84450g00001 1 68 AGC Kinase Gene Family AT5G62310 66.667 2.93e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84450g00001 - - gmx:100806311 119.012