Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84368g00001 ATGCAAAGCTTAACTTCTGTTGATTTTTCGTATAATAATCTATCTGGTTTGGTTCCTGGTACTGGTCAATTTAGTTACTTTAACTACACGTCTTTTTTGGGAAATCCTGATCTTTGTGGCCCTTATTTGGGTGCTTGTAAAGATGGTGTTGTTAATGGTGCTAACCAATCTCATCATGATAAGGGTCATCTTTCGTCTACCGTGAAGCTACTGCTTGTTATTGGGTTGCTTGCATGTTCCATTGTGTTCGCTATTGCAGCGATATTCAAGGCTCGGTCTTTGAAGAAGGCTAGTGAGGCTCGTGCGTGGAAATTGACTTCATTTCAACGTTTGGATTTCACTGCTGATGATGTTTTGGATTCCTTGAAGGAGGATAACATCATAGGAAAAGGAGGTGCTGGCATTGTTTACAAAGGGGCAATGCCGAATGGGGAACTCGTTGCTGTTAAAAGGCTTCCGGTTATGAGCAGAGGTTCTTCTCATGATCATGGATTCAATGCTGAGATTCAAACATTGGGGAGAATCCGACACAGGCACATTGTTAGGTTGTTGGGTTTCTGTTCGAACCATGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAG 616 0.4156 MQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVVNGANQSHHDKGHLSSTVKLLLVIGLLACSIVFAIAAIFKARSLKKASEARAWKLTSFQRLDFTADDVLDSLKEDNIIGKGGAGIVYKGAMPNGELVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84368g00001 205 Pfam Protein kinase domain 124 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme84368g00001 205 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 91 199 - -
Trme84368g00001 205 PANTHER LEUCINE RICH REPEAT KINASE 2 1 205 - -
Trme84368g00001 205 Gene3D Ribonuclease Inhibitor 1 51 IPR032675 -
Trme84368g00001 205 ProSiteProfiles Protein kinase domain profile. 122 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme84368g00001 205 SUPERFAMILY Protein kinase-like (PK-like) 117 205 IPR011009 -
Trme84368g00001 205 Gene3D Phosphorylase Kinase; domain 1 87 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84368g00001 Trme-Chr84368 12 627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84368g00001 1 205 Receptor kinase-like Gene Family AT5G65700 87.317 1.05e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme84368g00001 Pkinase 2.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84368g00001 - - lja:Lj2g3v1984370.1 379.793