Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84288g00001 GTCCTGGTAACTGGATATTTTCACAATGATTATCAACACCTTGCAAAGTCCAATCTAGTGTGCGTCTGCGGCGAAGCAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGCTATCACCGCATTCTCCTGGATTCGTAAATCTTTATTTGAGCTTCGATGGCCATAAACCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTTTGCACGATCCTGCTGCTTCAATGGAAGAGTCATACAACTGGATTGAGTTTCGACTTCAGATGAGGCTTTCTAATTTGCTTTTTACAACACCAAAGACCATTGATGTTTTCTCTAGTAAAGTATCACCTACTGCACTGAAAGAGACTAAAAAGTTTGCCTCCAAAACATTATTTATTTCCAAAAGTTTGAAACATTTTATGAAGTCGTCTGACGCAAACGCAATTCCATATCCACATGCAAAAAATACCTTGTTCGAAATTGCGTTGAAAAACAAACTAAGGGAATGGCTTTTGGAACGAATTGTCTTAGGATGCAAGACTACCGAGTATGATGCACAAGGCCAAGGTGTAATTCATTTGTGTACACTTTTGGGATATAGTTGGGCTATTGCTTTGTTTTCATGGGCAGGTCTGTCGCTTGATTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATAATGGA 696 0.398 VLVTGYFHNDYQHLAKSNLVCVCGEASVPVEIVQVGVYRCWLSPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAASMEESYNWIEFRLQMRLSNLLFTTPKTIDVFSSKVSPTALKETKKFASKTLFISKSLKHFMKSSDANAIPYPHAKNTLFEIALKNKLREWLLERIVLGCKTTEYDAQGQGVIHLCTLLGYSWAIALFSWAGLSLDFRDKFGWTALHWAAYNG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84288g00001 232 SUPERFAMILY E set domains 1 71 IPR014756 -
Trme84288g00001 232 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 232 - -
Trme84288g00001 232 SUPERFAMILY Ankyrin repeat 146 232 IPR036770 -
Trme84288g00001 232 Gene3D Immunoglobulins 1 74 IPR013783 -
Trme84288g00001 232 Gene3D - 148 232 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84288g00001 Trme-Chr84288 1 696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84288g00001 1 232 CAMTA Transcription Factor Family AT4G16150 55.794 3.12e-91 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84288g00001 K21596 - gmx:100776839 377.867