Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme84270g00001 | GGGCGATTCCAAATATTATGCTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCTCAAAATAGAACTGGTGGCATTAGTGTTTCCCTTTCTAGTCCGGATGGTCATGTTATCRGTGGTGGTGTTGCTAGGCTTATTGCTGCAAGCCCTGTCCAGGTATATTCTCAATTGCAATCTTAA | 183 | 0.4317 | GRFQILCLSGSYLVAEDGGPQNRTGGISVSLSSPDGHVIXGGVARLIAASPVQVYSQLQS | 60 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme84270g00001 | 60 | Gene3D | - | 1 | 58 | - | - | |
| Trme84270g00001 | 60 | CDD | DUF296 | 1 | 55 | IPR005175 | - | |
| Trme84270g00001 | 60 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 1 | 55 | IPR005175 | - | |
| Trme84270g00001 | 60 | ProSiteProfiles | PPC domain profile profile. | 1 | 60 | IPR005175 | - | |
| Trme84270g00001 | 60 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 1 | 55 | - | - | |
| Trme84270g00001 | 60 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 54 | IPR039605 | GO:0003680 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme84270g00001 | 1 | 54 | AT-hook Motif Nuclear Localized (AHL) Family | AT1G63470 | 70.370 | 1.87e-18 | 74.7 |