Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84186g00001 ATGGCTTTACCTTTGGAAGTTCTGGTGTGCTTTGTCTTTGCTTGTGGAGATTCTGGGAAACAATCCGGCCAAAGGTGTTTCTCGTGCTTGCTCCCAAGGGCAGCCTTGGTTCGAAGTGGATTCCATGGCGACGGATCCGCACAAGGATCTGCAAAGGGAATTGCTAATTTTGTCCACAAAGGAGGTCTAAAATTTGTTCATGGCAACATAAAGTCAACCAATGTACTCATAACACAAGAAAATGATGGTTGCATCACTGATTTAGGATTCACTCCCCTAATGAACACCTCATCAACCACGCCAAGCTCCAATGGCTACCGCTCCCCAGAAGCTTCTGAGTCAAGGAATATCACCACTCAGAAGAGTGTTTGGGTTAGGTTTGTGGTTCGTGAAGAATGGACAGCTGAAGTTTTCGATGAGGAGATGATTAGAGGAGGAGAATGTGTTGAAGAGGAGATG 459 0.4575 MALPLEVLVCFVFACGDSGKQSGQRCFSCLLPRAALVRSGFHGDGSAQGSAKGIANFVHKGGLKFVHGNIKSTNVLITQENDGCITDLGFTPLMNTSSTTPSSNGYRSPEASESRNITTQKSVWVRFVVREEWTAEVFDEEMIRGGECVEEEM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84186g00001 153 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme84186g00001 153 Gene3D Transferase(Phosphotransferase) domain 1 46 129 - -
Trme84186g00001 153 SUPERFAMILY Protein kinase-like (PK-like) 57 124 IPR011009 -
Trme84186g00001 153 PANTHER OS05G0588300 PROTEIN 47 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84186g00001 Trme-Chr84186 8 563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84186g00001 50 153 Receptor kinase-like Gene Family AT5G58300 41.791 1.39e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme84186g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84186g00001 - - cam:101501552 139.428