Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84177g00001 ATGGGTCCTCCACCAAATCGCAAACAAAAGTTATCTTATGTCTCTGAAAGAACAAGAAGATTGAAAGTTGTCTACGATGACCCTGACGCAACAGATTCGTCATCTGACGAAGCAAATTACCAACCAATGATGAGGAAGAGAGTTGTTCTTGAATTTGCACTCCCTGATGTTAGTGTTAATGAAACAAAAGTTGATAATGGATTGAGCAAGAATAAGAGTTCTGCAAAGACAACAACAACACCTATAGTGAAAGGAAAATCAAGCAAACACAAAGGTGTTCGAATGAGAAAATGGGGTCGATGGGCTGCTGAAATTCGTAATCCGATTAAAG 331 0.3897 MGPPPNRKQKLSYVSERTRRLKVVYDDPDATDSSSDEANYQPMMRKRVVLEFALPDVSVNETKVDNGLSKNKSSAKTTTTPIVKGKSSKHKGVRMRKWGRWAAEIRNPIK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84177g00001 110 MobiDBLite consensus disorder prediction 63 97 - -
Trme84177g00001 110 SUPERFAMILY DNA-binding domain 88 109 IPR016177 GO:0003677
Trme84177g00001 110 PIRSF PTI6 5 110 IPR017392 GO:0003700
Trme84177g00001 110 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 18 109 - -
Trme84177g00001 110 MobiDBLite consensus disorder prediction 63 85 - -
Trme84177g00001 110 ProSiteProfiles AP2/ERF domain profile. 89 110 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84177g00001 7 110 AP2-EREBP Transcription Factor Family AT1G68550 35.537 5.41e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84177g00001 - - tpra:123904484 204.527