Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84149g00001 ATGTCATTGTTGTGTTTACAGGAAAGAGTTGGTGCTTTGAAGGGAGGCATTGAATTCCTTGAAATTTGTGGGTTTGAGAAGATCGATGGTGGTGAAGTTTTGTTTTTGCCTAGGAACAAAGTTGAGATTGCAGTCCTGAATTCAGCTGGATCTGAACTCGACTCTGCAATAAAGAATCCCTTT 183 0.4044 MSLLCLQERVGALKGGIEFLEICGFEKIDGGEVLFLPRNKVEIAVLNSAGSELDSAIKNPF 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84149g00001 61 SUPERFAMILY PUG domain-like 6 59 IPR036339 -
Trme84149g00001 61 PANTHER F13M7.16 PROTEIN 5 61 - -
Trme84149g00001 61 Gene3D - 3 56 - -
Trme84149g00001 61 Pfam PUB domain 6 42 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84149g00001 Trme-Chr84149 1 183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84149g00001 5 61 C2H2 Transcription Factor Family AT1G04850 70.175 1.49e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84149g00001 K24348 - gmx:100779218 103.99