Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme840g00001 AACAACAACAGAGAAAGAAACGGTTACCTTGAACAGTACCCACTACCACCTCCTAATGATTTCTACTCAAATATGAACGCTCCCCCCAATTCCATGCTGCCTCACCTTCATAATTATAATTATAATTATAATCTCAATCACCACCATCCTTGTTATGCATCAACAACAAGAACAAGTAATCAACGCCAAGTTATAGATGTAAATGTTTGCCAACCACCTCCGTACGCTTGGAATGTAATGAACGATGTGAACTTGCATAAACACACTCTTCGAATCGAACTTGATCCCAACAATCCCGACCACCACTTGATTTCCTTCACTTTTGATGCCAGCTACGATGGCAGAATTACAATAATTTACTTAGCCAAAGAAGAAGAAAATTGTAGGTTTACTCCTCTATTTCCCCAAACATCTAAATCAATCACGTTCCCCTTCCAAAGAGGACTTGGACAGAAATTTTGTCAACCTTCAGGAACAGGCATTGACTTACGTTTCTTTCAGTTGGACGATCTTTCAAACCCCTCACCTGAACAAGATGTATTCCCCCTCATAGTATGTGCTGAAACAGACGCTTTGACAGTAGATGCATCCCCTTACATGCAAATAACTCAAGCTGTCTTGGACAAAAGCAATGGAGCCACTGGTACTTTCCAGGTTAAAGTAGTTAAGCAGGTTCTATGGATTGATCAAGTTCGTTTTGAGCTGATTGAGATATATGGAACTGGAGACTCAACGCCATCTGATTTTGATCGTAATGATCCTGGGAAGGACTGCGTAATATGCATCATTGAACCCAGGGATATTGTTGTCTTACCTTGCCGTCACATGTCCATGTGTAATGCAATCAATAGAAAATTAGATCCTACTCGTTTCATGTTTAATCCCGCATCATCTATATTGTACAGATTTAAGCATATAAAGGAAGGAGATGAACAATCACCACGAAATGACATGGACTGGAAATTGATAATACTGCTACAAGAACAAAACACGGTTTTGAGTGACTCTGGGAGGAAAATTGGTCAATTTTCTGGTTATGGCTTGTTCTGTCAAGTTGCAAGTGGTGGGGTTGAGTTGGTTTTTAGTGCAGAATTTGTTGCCCTGATAGCTCATGATACTCCTTCATAA 1128 0.3998 NNNRERNGYLEQYPLPPPNDFYSNMNAPPNSMLPHLHNYNYNYNLNHHHPCYASTTRTSNQRQVIDVNVCQPPPYAWNVMNDVNLHKHTLRIELDPNNPDHHLISFTFDASYDGRITIIYLAKEEENCRFTPLFPQTSKSITFPFQRGLGQKFCQPSGTGIDLRFFQLDDLSNPSPEQDVFPLIVCAETDALTVDASPYMQITQAVLDKSNGATGTFQVKVVKQVLWIDQVRFELIEIYGTGDSTPSDFDRNDPGKDCVICIIEPRDIVVLPCRHMSMCNAINRKLDPTRFMFNPASSILYRFKHIKEGDEQSPRNDMDWKLIILLQEQNTVLSDSGRKIGQFSGYGLFCQVASGGVELVFSAEFVALIAHDTPS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme840g00001 375 PANTHER MAHOGUNIN 35 280 IPR045194 GO:0061630
Trme840g00001 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 287 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme840g00001 Trme-Chr840 1 2620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme840g00001 76 286 C3H Transcription Factor Family AT3G06140 51.389 5.20e-70 222