Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84072g00001 ATCGGAGAATTTGTCTCGGTTTATTCGCAATTAGACATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAAAGGAAGACAAATTGATGATGATGAAGAGAAGGAAAGTTTGCCTAATCCTTTACAAGCTGCAGCTGCATCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGAGATTATAAGGTGAGACTTGGTGTTGTTGTAGCTGCAGTAAGTTTTGCTTTGGTTGTTTTTGGTTGGTTTGGGGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTGTTTTGAGGGTTTTGGTTGGTGGTTGGGTGGCTATGTCCATCACTTTTGGGCTTACTAAGTTGATCGGCTCAAGCAGACTTTAG 387 0.4031 IGEFVSVYSQLDIEVAQMKREKEKGRQIDDDEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFIRDYKVRLGVVVAAVSFALVVFGWFGAVLGKAPIFRSVLRVLVGGWVAMSITFGLTKLIGSSRL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84072g00001 128 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 123 IPR008217 GO:0005384|GO:0030026
Trme84072g00001 128 Pfam VIT family 33 120 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84072g00001 Trme-Chr84072 1 387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84072g00001 1 128 Nodulin-like Gene Family AT3G43660 66.406 1.74e-57 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84072g00001 K22736 - gmx:100807991 196.052