Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8404g00001 TTGAAATATCATGACACTGGAAGAGAGAAAGAATACTTACCACAAGTTGGTCAATGGAATATGATGAACAAGGAATTTAGTCAGGAACCTGTCATTCCTGTATATTCAGCAAGACCAGATCAAGTCAAGAAAGCTTTGAAGTATGTACAGAATACTGCTCTAGACAAACTTGGTGGTAAAGAGCTAGAATTCTTGATTGCCATTCTTCCAGACAACAATGGCTCTTTGTATGGTGATCTCAAAAGAATCTGCGAAACGGATCTGGGGTTGATTTCTCAATGCTGCCTAGCAAAATATGTAATCAAGATTAACAGACAGTACCTGTCAAATGTTGCACTAAAAATCAATGTGAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCTTTAAGTTGGAAGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATGCAGAATCTGGAGACGATAGTTGCCCATCCATTGCTGCTGTTGTAGCCTCCCAGGACTGGCCAGAAGTAACGAAGTATGCAGGGTTAGTTTGCGCTCAGCCTCACCGTGAAGAGCTCATCCAAGACCTTTTCAAATGT 591 0.4044 MKYHDTGREKEYLPQVGQWNMMNKEFSQEPVIPVYSARPDQVKKALKYVQNTALDKLGGKELEFLIAILPDNNGSLYGDLKRICETDLGLISQCCLAKYVIKINRQYLSNVALKINVKMGGRNTVLLDALSWKIPLVSDIPTIIFGADVTHAESGDDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8404g00001 197 Gene3D - 133 197 IPR036397 GO:0003676
Trme8404g00001 197 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 20 194 - -
Trme8404g00001 197 Gene3D - 13 130 - -
Trme8404g00001 197 Pfam Piwi domain 65 194 IPR003165 GO:0003676
Trme8404g00001 197 SUPERFAMILY Ribonuclease H-like 53 196 IPR012337 -
Trme8404g00001 197 ProSiteProfiles Piwi domain profile. 64 197 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8404g00001 Trme-Chr8404 3 1822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8404g00001 1 196 Eukaryotic Initiation Factors Gene Family AT5G43810 65.823 2.23e-103 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8404g00001 K11593 - gmx:100810235 357.066