Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84034g00001 ATGATGTTGTGGCCATTCAAGGTCATTGGGGAGAATGATGACAAACCCATGATTGTTGTTAACTACAAAGGCCAAGAGAAGAAATTTTGTGCTGAGGAAATATCGTCAATGGTCCTCACTAAGATGCGAGAGGTTGCAGAGAAATTYKTAATGTCCCCWGTAAAKAATGCAGTTATTACSGTGCCTGCTTACTTCAATGATTCTCAGCGAAAAGCCACCATAGATGCTGGTACTATTGCTGGCCTAAATGTCATACGGATAATGAATGAACCAACAGCTGCTGCTCTGGCATATGGCCTTGACAAGAGAACTAACTGTGATGGAGAACGAAATATTTTCATCTTTGACCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTTACAATTGAGGACGAGATCTTTCATGTGAAGGCCACTGCTGGAAACACTCACCTCGGAGGAGAGGATTTTGATAATAGAATGGTGAACTACTTTGCACAGGAGTTTAAGAAGAAGAACAAGGTGGACATTATTGGAAACTCGAGAGCCTTAAGGAGGTTGAGAACRGCATGYGAGAGAGCGAAAAAGACTCTATCTTTTTCTTCTTTCACCACCATTGAGGTTGATTCTTTATTTCAGGGTATTGACTTCTTTACATCAATCACCCGTGCCAAGTTTGAGGAAATCAACATGGATCTTTTCAACGAGTGTCTGAAAACTGTTGAGAGTTGTCTTATTGATGCCAAGATGGACAAGAGTTCTATCCATGATGTTG 754 0.4111 MMLWPFKVIGENDDKPMIVVNYKGQEKKFCAEEISSMVLTKMREVAEKFXMSPVXNAVITVPAYFNDSQRKATIDAGTIAGLNVIRIMNEPTAAALAYGLDKRTNCDGERNIFIFDLGGGTFDVSLLTIEDEIFHVKATAGNTHLGGEDFDNRMVNYFAQEFKKKNKVDIIGNSRALRRLRTACERAKKTLSFSSFTTIEVDSLFQGIDFFTSITRAKFEEINMDLFNECLKTVESCLIDAKMDKSSIHDV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84034g00001 251 FunFam Endoplasmic reticulum chaperone BiP 12 109 - -
Trme84034g00001 251 FunFam Heat shock protein ssb1 1 37 - -
Trme84034g00001 251 Gene3D - 38 102 - -
Trme84034g00001 251 SUPERFAMILY Actin-like ATPase domain 2 102 IPR043129 -
Trme84034g00001 251 PRINTS 70kDa heat shock protein signature 120 130 - -
Trme84034g00001 251 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme84034g00001 251 PANTHER HEAT SHOCK PROTEIN 70KDA 1 251 IPR013126 GO:0005524|GO:0140662
Trme84034g00001 251 Gene3D Actin; Chain A, domain 4 146 229 - -
Trme84034g00001 251 ProSitePatterns Heat shock hsp70 proteins family signature 2. 114 127 IPR018181 -
Trme84034g00001 251 FunFam Heat shock 70 kDa 146 229 - -
Trme84034g00001 251 Gene3D - 103 251 - -
Trme84034g00001 251 FunFam Heat shock 70 kDa protein 110 185 - -
Trme84034g00001 251 Pfam Hsp70 protein 3 251 IPR013126 GO:0005524|GO:0140662
Trme84034g00001 251 SUPERFAMILY Actin-like ATPase domain 107 251 IPR043129 -
Trme84034g00001 251 Gene3D - 3 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84034g00001 Trme-Chr84034 2 755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84034g00001 4 251 Calmodulin-binding Proteins AT3G12580 75.403 5.84e-139 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84034g00001 K03283 - gmx:102667572 402.905