Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme84031g00001 ACAGGAGGACCTGATTGGGAGGTGAAGTTAGGAAGATTGGACAGCTTGACAGCTAGTCAAGAAGACTCGGACAACATCATGCCAAGTCCAAGAGCCAATGCGAGCACTCTCATCGATCTCTTCCAACGATTCAACCTTACWGTCAAAGACCTTGTAGCACTCTCAGGATCACACTCTATCGGCAAAGGTCGATGTTTTTCAATCATGTTTAGGCTATACAATCAATCCGGTAGCGGAAAACCAGACCCTGCAATTGATCCCGATTTTAGACTAGAGCTTAACAAGCTATGTCCACTAGATGTTGATCAAAATAAGACAGGGAACCTTGATTCAACTCCGGTGATTTTCGATAACCAATATTTCAAGGACTTGGTTGGAGGAAGAGGATTTCTCAACTCTGATCAAACACTTTTCACTTACCCTCGAACAAAGGG 434 0.4378 TGGPDWEVKLGRLDSLTASQEDSDNIMPSPRANASTLIDLFQRFNLTVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIDPDFRLELNKLCPLDVDQNKTGNLDSTPVIFDNQYFKDLVGGRGFLNSDQTLFTYPRTKG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme84031g00001 145 Gene3D Peroxidase, domain 2 28 142 - -
Trme84031g00001 145 PANTHER PEROXIDASE 72-RELATED 2 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 SUPERFAMILY Heme-dependent peroxidases 2 144 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 Pfam Peroxidase 1 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 PRINTS Haem peroxidase superfamily signature 109 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 PRINTS Haem peroxidase superfamily signature 50 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 PRINTS Haem peroxidase superfamily signature 2 14 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 FunFam Peroxidase 28 145 - -
Trme84031g00001 145 ProSiteProfiles Plant heme peroxidase family profile. 1 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 Gene3D - 1 27 - -
Trme84031g00001 145 ProSitePatterns Peroxidases proximal heme-ligand signature. 50 60 IPR019793 -
Trme84031g00001 145 PRINTS Plant peroxidase signature 2 17 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 PRINTS Plant peroxidase signature 123 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 PRINTS Plant peroxidase signature 49 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme84031g00001 145 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme84031g00001 Trme-Chr84031 291 724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme84031g00001 1 139 Peroxidase AT2G22420 81.295 3.09e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme84031g00001 K00430 - gmx:100793330 260.766