Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83881g00001 ATGGCAAATTTTTATACTGCGGAGAATCGAAATCAAGTGGCTGTGTCAACTAACAAGGAAGTGGATGGTCATATCCCAAACTATCCGAGCTTACCTCCTCAGCTTGTGTGTCAACTTCATAATTTGACTATGCATGCTGATGTGGAGACCGATGAAGTGTATGCGCAGATGACCTTGCAACCTCTGAATGCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGTTGGGCACTCCGAGTAAACAGCCAACAAACTACTTCTGCAAGACTTTGACTGCTAGTGACACAAGCACTCATGGGGGATTCTCTGTGCCTCGCCGCGCAGCTGAGAAAGTGTTTCCTCCATTG 348 0.4684 MANFYTAENRNQVAVSTNKEVDGHIPNYPSLPPQLVCQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83881g00001 116 Gene3D - 85 116 IPR015300 -
Trme83881g00001 116 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 116 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme83881g00001 116 SUPERFAMILY DNA-binding pseudobarrel domain 72 116 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83881g00001 Trme-Chr83881 24 694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83881g00001 4 116 B3 DNA Binding Superfamily AT1G30330 84.956 6.08e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83881g00001 - - gmx:100798719 213.001