LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme83837g00001	GGCCGCAATGGATCCATATTGATTGCAGGGTTCTCTGCAGAGAGGAATGCATTACCAAACCATGGTCTAAGAGGTTTTGAAGTGATAGATAATGCAAAATCACAAATAGAGGCCATATACCCCAGAGTTGTCTCATGTGCTGACATCCTAGCATTGGCAGCTCGTGATGCCGTCAATTTG	180	0.45	GRNGSILIAGFSAERNALPNHGLRGFEVIDNAKSQIEAIYPRVVSCADILALAARDAVNL	60

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme83837g00001	60	PRINTS	Plant peroxidase signature	24	37	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme83837g00001	60	PRINTS	Plant peroxidase signature	43	53	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme83837g00001	60	Pfam	Peroxidase	1	59	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme83837g00001	60	SUPERFAMILY	Heme-dependent peroxidases	1	59	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Trme83837g00001	60	Gene3D	-	1	60	-	-
	Trme83837g00001	60	PANTHER	PEROXIDASE 25-RELATED	2	60	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme83837g00001	60	ProSiteProfiles	Plant heme peroxidase family profile.	1	60	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme83837g00001	Trme-Chr83837	20	199	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme83837g00001	1	60	Peroxidase	AT2G41480	70.000	7.63e-23	86.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme83837g00001	K00430		-	pop:7474697	95.9005