Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8375g00001 ATGGCTTCTTTGCCTCTTTATGGTAATAAACCTTTAGGAATTCAAGCACACTCTATGATCCATAAGCCTTCTAATGGATTTGGAAACTCTTATGGACATCATCATCATCATGGTTGGTCAAACTCAAGAACATTTATGGATCAACAACCTGGAATAGCGAAACTAGGCGCGGAAAATTTTCATCGAGCGACAACATCGGCAGCGGCATTATCATCATCAAGAGGAAGTGTTGGTAGATTTGAAGTGGTGGATGCAATGATGAATTCTTCAGCTAATAAAGAAATGAAGCAAAAACATCTTGATTTATCTCTCAAGCTATGA 321 0.3832 MASLPLYGNKPLGIQAHSMIHKPSNGFGNSYGHHHHHGWSNSRTFMDQQPGIAKLGAENFHRATTSAAALSSSRGSVGRFEVVDAMMNSSANKEMKQKHLDLSLKL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8375g00001 106 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 106 IPR044246 GO:0009788
Trme8375g00001 106 Coils Coil 92 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8375g00001 7 106 C2H2 Transcription Factor Family AT5G10970 42.373 1.46e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8375g00001 - - lja:Lj5g3v0526470.1 108.997