Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83755g00001 ATGGCTACGATGCTTAATGGAGCAGCAATCATGGATGGAGCTTTGCTACTCATAGCTGCTAATGAAAGCTGTCCACAACCACAAACCTCTGAGCATTTAGCTGCTGTGGAAATTATGCGTCTTCAGCACATCATAATCCTTCAGAACAAGGTTGATCTAATTCAAGAGAATGTGGCTATCAATCAGCATGAAGCAATTCAGAAGTTTATAGAAGGAACGGTTGCTGATGGTGCACCAGTCGTACCTATTTCAGCACAATTGAAGTATAATATTGATGTTGTGTGCGAGTATATCGTGAAAAAGATCCCAATCCCTGAAAGGAACTTTATTTCTCCACCTAATATGATAGTAATTNGGTCCTTTGATGTCAATAAACCTGGTTTTGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTGAGG 432 0.4028 MATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIEGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIXSFDVNKPGFEVDEIKGGVAGGSILR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83755g00001 144 Gene3D - 1 107 IPR027417 -
Trme83755g00001 144 SUPERFAMILY Translation proteins 107 143 IPR009000 -
Trme83755g00001 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 105 IPR027417 -
Trme83755g00001 144 Gene3D Translation factors 108 144 - -
Trme83755g00001 144 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 144 - -
Trme83755g00001 144 Pfam Elongation factor Tu GTP binding domain 3 103 IPR000795 GO:0003924|GO:0005525
Trme83755g00001 144 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 106 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83755g00001 Trme-Chr83755 31 554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83755g00001 1 144 Eukaryotic Initiation Factors Gene Family AT1G04170 91.667 1.32e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83755g00001 K03242 - csv:116403970 279.641