Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83752g00001 TACAGGTCTCTAAGGCCTTCCCTTGTCCTACCAAAGAACCCCAACCTCTCCCTTGTCGCAAACTTATTCACAAATGTCTCTTATTTATACAACAAAACCGCCCTCATCGACGCTGACTCTTCCCAAACCCTCTCCTTCGCTCAACTCAAAACACAAGTCTCTAAGCTCGCACATGGTTTGCTCAACCTCGGCATAAACAAAAATGATGTCATCCTCATCCTTTCCTCCAACAACATCCAATACCCCATTTGTTTCCTCGCTGCCACCGCTATTGGCGCAATAGTCACCACTGCAAATCCCGTTTACACCATCGCGGAACTCTCCAGACAAATCAATGACTCCAATCCTAAGATGGTTATCACCGTCCCGGAATTATGGAATAAAGTGAAGGGTTTCAATTTCGACCTTCCTGCAGTCATCATCGGTTCGAGTAACATCGCGGGTTCGAATTCTAAGTTCACGAGTTTTGAGACGTTGATGGAGGCAGCAGGTATTACAATATTTTTATAA 510 0.451 YRSLRPSLVLPKNPNLSLVANLFTNVSYLYNKTALIDADSSQTLSFAQLKTQVSKLAHGLLNLGINKNDVILILSSNNIQYPICFLAATAIGAIVTTANPVYTIAELSRQINDSNPKMVITVPELWNKVKGFNFDLPAVIIGSSNIAGSNSKFTSFETLMEAAGITIFL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83752g00001 169 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 158 - -
Trme83752g00001 169 Gene3D - 1 165 IPR042099 -
Trme83752g00001 169 SUPERFAMILY Acetyl-CoA synthetase-like 15 138 - -
Trme83752g00001 169 Pfam AMP-binding enzyme 30 125 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83752g00001 Trme-Chr83752 1 510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83752g00001 1 161 Monolignol Biosynthesis Gene Families AT4G05160 55.758 3.64e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83752g00001 K01904 - lja:Lj3g3v3054590.1 204.912