Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83722g00001 AATAGAGCACTTGACCCCGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAACCTTCTTTGTGCACTTAACTTCACACAAGAAAACANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNCTCGGATCTTAACTACCCTTCTTTTATTGCTTTCTTTAATGCGGAAAACTCCTCTTCAAGAACATCCCAAGAATTTAGCAGAACAGTGACCAATGTTGGCGAGGAAAAAACAACTTATGTTGCTAGCATTACTCCAATTGAAGGGTTCCATGTCACTGTTATCCCTGATAAATTGGTGTTCAGTAAGAAGAATGAGAAGCTAAGCTACAAGTTGAGGATTGAAGGCCCAAGAATGACACAAGAGGATGAAGTAGCTTTTGGCTACCTCACTTGGCAGAATGAGAAGCATGTGGTGAGGAGCCCTATTGTTGTAACCAATAGCCAGTAA 465 0.3634 NRALDPGLVYDVGVQDYVNLLCALNFTQENXXXXXXXXXXXXXXXXSDLNYPSFIAFFNAENSSSRTSQEFSRTVTNVGEEKTTYVASITPIEGFHVTVIPDKLVFSKKNEKLSYKLRIEGPRMTQEDEVAFGYLTWQNEKHVVRSPIVVTNSQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83722g00001 154 Coils Coil 24 30 - -
Trme83722g00001 154 Gene3D - 44 153 - -
Trme83722g00001 154 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 150 IPR045051 -
Trme83722g00001 154 Pfam Fibronectin type-III domain 48 150 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83722g00001 Trme-Chr83722 1 465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83722g00001 1 140 Subtilisin-like Serine Gene Family AT5G67090 40.845 1.99e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83722g00001 - - gmx:100786751 199.519