Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83721g00001 ATGTCACCTCTAAGTCAAAACTCGATTTCGAATTGTCCCAAACGATTGAGTGTTCCAACCCATGGAGTGGCTGCTGGATTGAACCCTATTGCAGGATTAGTGTTTGAGATTATTATAACATTTGGGTTGGTTTACACAGTTTATGCCACAGCAGCTGACCCCAAAAAGGGTTCATTGGGCACCATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCCAACATCTTAGCGGCCGGTCCATTCAGTGGCGGTTCAATGAACCCGGCTCGCTCATTCGGTCCAGCTGTGGTTAGTGGAAACTTTGCTGATAACTGGATCTACTGGGTTGGTCCTTTGATAGGAGGAGGCTTGGCTGGGTTGATTTATGGTGACATCTTCATTGGTTCATATGCCCCAGCACCATCAACTGAAACATACCCTTAA 423 0.4704 MSPLSQNSISNCPKRLSVPTHGVAAGLNPIAGLVFEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGLIYGDIFIGSYAPAPSTETYP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83721g00001 140 PRINTS Major intrinsic protein family signature 68 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme83721g00001 140 PRINTS Major intrinsic protein family signature 105 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme83721g00001 140 PRINTS Major intrinsic protein family signature 35 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme83721g00001 140 Gene3D Glycerol uptake facilitator protein. 7 131 IPR023271 -
Trme83721g00001 140 PANTHER AQUAPORIN-8 16 128 IPR034294 -
Trme83721g00001 140 SUPERFAMILY Aquaporin-like 21 128 IPR023271 -
Trme83721g00001 140 Pfam Major intrinsic protein 22 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83721g00001 Trme-Chr83721 124 733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83721g00001 17 140 Major Intrinsic Protein MIP AT4G17340 85.484 2.07e-72 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83721g00001 K09873 - tcc:18606242 216.083