Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83655g00001 GCGGCAAATGCTCATGAATTTATAATTTCACTTCCACAGGGCTACGATACACTTGTTGGTGAGCGTGGAGGCCTACTGAGTGGAGGACAGAGGCAGAGAATTGCCATTGCCCGAGCTCTTTTGAAGAATGCTCCCATCCTTATACTTGATGAG 153 0.4771 AANAHEFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDE 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83655g00001 51 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 51 IPR027417 -
Trme83655g00001 51 Pfam ABC transporter 13 51 IPR003439 GO:0005524
Trme83655g00001 51 Gene3D - 2 51 IPR027417 -
Trme83655g00001 51 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 51 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83655g00001 Trme-Chr83655 430 755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83655g00001 2 51 Calmodulin-binding Proteins AT2G36910 76.000 4.64e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83655g00001 K05657 - jre:108983285 91.2781