Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83621g00001 ATGCTTCCCAGTGGATTTCTAATTCGACCATGCGAGGGCGGTGGATCCATTATTCATATTGTTGATCATGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTACTAAGGCCCCTCTATGAATCGTCAAAAATCTTGGCTCAAAAATTGACTATTGCAGCATTACAACACATAAGACAGATAGCGCAAGAATCAAGTGGTGAAATTCAGTATGGTGGCGGGCGCCAACCTGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGTTTCAATGATGCTGTGAATGGATTTGTTGATGATG 301 0.4219 MLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83621g00001 100 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 100 IPR044830 GO:0003700
Trme83621g00001 100 SUPERFAMILY Bet v1-like 1 62 - -
Trme83621g00001 100 Pfam START domain 1 59 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83621g00001 Trme-Chr83621 14 619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83621g00001 1 100 Homeobox Transcription Factor Family AT2G34710 89.000 1.83e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83621g00001 K09338 - gmx:100807428 201.06