Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8359g00001 ATGGAACCTGCATCTGCGGTAACTCCTCCAGCTTCTAACACTGAACATTCCTCCACCAAAATATCTGCTGAAAATAGCAATGCACATGATTCACCGTCCTTGTCACCAGCTTCTAACACTGAACATTCCTCCACCAAAATATCCGCTGAAAATAGCAATGCACATGATTCACCGTCCTTGTTACCAGCTCCTAACACTGAACATTCCTCCACCAAAATATCCGTTGAAAATAGCAATGCACATGACTCACCGTCCTTGTCACCAGCTTCTGGTATATCTTCCTGGGCAAGAAATCTGAGGCTTGGGGCAGCAGATCACTATCAGAACTCACAGACTGGGAACAGTGGTATTTCTGCATTTGTTCGCCTGGCTAGTGGGATTGGACTACGAAGTCCCTCAAATGAGACTGCTCCAGGCAACTCAGGAGCTGAGCAAACTAATTTAATTGAATCATTCACCAAAGGGTTGGTGGACTCCTCCAAGAGTGCAGTAAAGGCGATGCAGACCAAAGCACGACATATTGTCTCTCAAAATAAACGCAGATACCAGGTCAGTTGA 558 0.457 MEPASAVTPPASNTEHSSTKISAENSNAHDSPSLSPASNTEHSSTKISAENSNAHDSPSLLPAPNTEHSSTKISVENSNAHDSPSLSPASGISSWARNLRLGAADHYQNSQTGNSGISAFVRLASGIGLRSPSNETAPGNSGAEQTNLIESFTKGLVDSSKSAVKAMQTKARHIVSQNKRRYQVS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8359g00001 185 MobiDBLite consensus disorder prediction 7 92 - -
Trme8359g00001 185 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8359g00001 Trme-Chr8359 981 1538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8359g00001 89 183 Protein tyrosine phosphatase (PTP) family AT3G19420 49.515 2.13e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8359g00001 K01110 - gmx:100801622 162.155