Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83569g00001 GGTTATGATACAATAGTAGGAGAGAGAGGAGTTCAATTATCCGGGGGACAGAAACAGCGTGTGGCAATTGCGAGAGCTATAGTGAAGAATCCAAAAATATTATTACTAGATGAAGCAACAAGYGCACTTGATGCTGAGTCTGAGAAGGTGGTTCAAGATGCACTTGATCGTGTTATGGTGSAGCGGACRACAATAATAGTAGCTCATAGGTTATCAACTATTAAGGGTGCAGATTTAATTGCAGTAGTTAAGAATGGTGTGATAGCAGAGAAAGGTAAACATGAAGCATTGCTCCGTAAGGGTGGCGACTATGCTTCTTTAGTAGCATTACATACAAGTGCTTCTACATCTTAA 354 0.4011 GYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVZRTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLRKGGDYASLVALHTSASTS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83569g00001 117 Gene3D - 1 112 IPR027417 -
Trme83569g00001 117 PANTHER ABC TRANSPORTER B FAMILY 1 110 IPR039421 -
Trme83569g00001 117 Pfam ABC transporter 3 41 IPR003439 GO:0005524
Trme83569g00001 117 FunFam ABC multidrug transporter, putative 1 112 - -
Trme83569g00001 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 110 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83569g00001 Trme-Chr83569 97 450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83569g00001 1 114 Calmodulin-binding Proteins AT2G36910 65.517 9.37e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83569g00001 K05658 - gmx:102660078 216.853