Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme834337g00001 GCCAACAAGGAACAGTTGGTGCAACTAATGTTTGAAAACTTCAACATATCGGGGTTTTATGCATCAGAACAATCAGTATTATCGCTGTATGCTGTGGGACGTATCTCAGGGTGCACTGTTGATATTGGACATGGAAAAATAGGTAACCCACATCTGAAGCAATAG 165 0.4121 ANKEQLVQLMFENFNISGFYASEQSVLSLYAVGRISGCTVDIGHGKIGNPHLKQ 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme834337g00001 54 CDD NBD_sugar-kinase_HSP70_actin 4 48 - -
Trme834337g00001 54 Gene3D - 1 48 - -
Trme834337g00001 54 SUPERFAMILY Actin-like ATPase domain 2 40 IPR043129 -
Trme834337g00001 54 PANTHER ACTIN 1 46 IPR004000 -
Trme834337g00001 54 PRINTS Actin signature 2 15 IPR004000 -
Trme834337g00001 54 PRINTS Actin signature 27 46 IPR004000 -
Trme834337g00001 54 Pfam Actin 2 46 IPR004000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme834337g00001 1 45 Cytoskeleton Gene Families AT5G09810 51.111 8.58e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme834337g00001 K16615 - gmx:100803056 92.8189