Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8340g00001 ATGTTAGCAATTTCCTTGGACTTGCTGAATGGCGGAATGAGGAGTTCCAGGTGGGCATCAACTGTGAACAGAGTGTTCAATCCAAGAGGGAGGATAATTGAATTTAGCTTGAACACTCTCCGCATTTGTGTATGCTTCATCGTCTTATATCTCTCTGGCCCACTTGGATTTTTTCGATACAAAGACTATTTAGGGTTCTTGTGCACAACACCTGGTATTGATTTTCATGAGATAAAGAAGTACACAAACTCACCATGTAACAGAACCATGGGTCACCCATATAATTTAAACACTCCATCAATTACAGTTTCACATCTYGTGAGAACTCAAGTTGTAACTCGCACAGTCACAAATGTTGCTAAGCAAGAAACCTAYGTGATGACGGCTAGAATGCAACCAGCAGTTGCSATTGAAGTYAACCCTCCAGCAATGACAATCAAAGCTGGTGCATCACGTAAGTTTACTGTAACACTTACCGTTCGATCAGTGACAGGAACATATAGTTTTGGAGAGGTTTTAATGAAGGGAAGCAGAGGACATAAAGTGAGGATTCCTGTTCTGGCCAATGGATACTCAAGATAG 582 0.4107 MLAISLDLLNGGMRSSRWASTVNRVFNPRGRIIEFSLNTLRICVCFIVLYLSGPLGFFRYKDYLGFLCTTPGIDFHEIKKYTNSPCNRTMGHPYNLNTPSITVSHLVRTQVVTRTVTNVAKQETYVMTARMQPAVAIEVNPPAMTIKAGASRKFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8340g00001 193 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 186 IPR045051 -
Trme8340g00001 193 Pfam Fibronectin type-III domain 95 187 IPR041469 -
Trme8340g00001 193 Gene3D - 67 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8340g00001 Trme-Chr8340 98 1336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8340g00001 60 193 Subtilisin-like Serine Gene Family AT4G30020 71.852 4.79e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8340g00001 - - gmx:100784999 236.113