Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8330g00001 ATGCTAAATCTAAGGTTACTTTCTATTCGAGACCGAAAGGGATATGTAAGCCTTCCACATGGTCTTGACTTATTGCCAGAAAATATGAGATATTTTTTGTGGCATGGATATCCATGGAAGTCTTTGCCTCCGACCTTTTGTCCTGAAATGCTTGTGGAGCTTTCCCTCAAAGAAAGCCGCATACAAAAACTTTGGAATGGAGTACTGAATTTGCCAAATTTAGAGACACTTGACCTCAGTTACTCCAAAATGCTGATAGAGTGTCCAAATGTGGCTGGTTCCCCGAATCTAAAACGTGTAACACTTGATAATTGTGAAAGNNNNNNNNNNANNNNNNNNTCAATTTTTCTTCTCCAAAAGCTTGAAAGATTATACTTGTCTAGATGTACGTCACTTAAGAGCCTTTCCGGCAACACTTGTTCACCAGTCCTCGGTGAATTGAGTGCTTTGGATTGCACTAATCTCCAAGAGTTCTCAGTCACATTTGCTTCAATTGACCGGTTGGCTTTGGGTTTATCCAAGTCGGGTGGGAATGAACTTCCATCATCAATATTGCATACAAAAAATCTTAAAACCTTTGTCTTTCCAATGATCGAAAGTCTTGTGGATCTTCCTAAAAACTTTGCCGATTGTATTTGGCTTCTGAGTCCACTGAATCCTGAACATAATCCTTTCATCACCTTACATAAAGTACTTTCTAGTCCAGCATTCATGAGTGTAAAACACTTAAACTTGTCTAATATTCCTAACTTGACTGAATTCCCATACAATATCTCCTTACCTAAATTAGAGTCTTTAATACTAATTGACATGGTCATTAGAAGCTTGTCTGAAACCATTATGCATCTTCCCCAACTCAATTGGGTTCGTGTTTACAATTGTAAAATGCTTCAATCTATTCCAGCACTTTCAAAGTTCATTCCATTTTCCATTGTCTCGAATTGTGAATCCCTTGAGAAAGTGTTGATCAGTTCAATTTTTGAACCATATCACAAACCCAATCGTAGTTTTACTGTACTCCTTAACTGCAAAAAATTGAATCCACATTCATACCATACAGTTTTGAAATATGCTATTGATGGAATGGAACATGGTGCAAGACTAAATTCAGAAACTGAAGAAGATGGTATTATAGGGTACTTTTTACCTGCTATGCCAGACATAGAAGATTGGTTCCATTACCGTTCAACACAAATTTTGGATGTGAGTGCTACTTGA 1218 0.3686 MLNLRLLSIRDRKGYVSLPHGLDLLPENMRYFLWHGYPWKSLPPTFCPEMLVELSLKESRIQKLWNGVLNLPNLETLDLSYSKMLIECPNVAGSPNLKRVTLDNCEXXXXXXXSIFLLQKLERLYLSRCTSLKSLSGNTCSPVLGELSALDCTNLQEFSVTFASIDRLALGLSKSGGNELPSSILHTKNLKTFVFPMIESLVDLPKNFADCIWLLSPLNPEHNPFITLHKVLSSPAFMSVKHLNLSNIPNLTEFPYNISLPKLESLILIDMVIRSLSETIMHLPQLNWVRVYNCKMLQSIPALSKFIPFSIVSNCESLEKVLISSIFEPYHKPNRSFTVLLNCKKLNPHSYHTVLKYAIDGMEHGARLNSETEEDGIIGYFLPAMPDIEDWFHYRSTQILDVSAT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8330g00001 405 Gene3D Ribonuclease Inhibitor 2 139 IPR032675 -
Trme8330g00001 405 SUPERFAMILY L domain-like 3 347 - -
Trme8330g00001 405 Gene3D Ribonuclease Inhibitor 140 347 IPR032675 -
Trme8330g00001 405 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 311 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8330g00001 Trme-Chr8330 287 1792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8330g00001 1 270 WRKY Transcription Factor Family AT4G12020 31.148 2.04e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8330g00001 - - psat:127076382 458.373