Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83218g00001 CAAATAATGGGCGAGGAATTATCAGGTTTGACAGTCAAAGAATTACAGAGTTTGGAGAACCAGTTGGAAATCAGCCTCCGTGGTGTTCGTGTGAAAAAGGAGCAACTTTTTATGGATGAAATACAAGAACTAAATCGAAAGGGAGACATCATATACCAAGAAAATGTGGAACTATACAGGAAGGTCTATGGAACAAAAGATAAGAATGGAACAAACAGAAATTCTGTTCTCACAGATGGTCTAGGCATAGGAGAAGGAGACGAATCCGACGTGCCTGTGAATCTCCAGCTCAGCCAGCCACAGCAACAACACTACAAGGCACCCTCAGGAACTACAAAACTGGG 344 0.4273 QIMGEELSGLTVKELQSLENQLEISLRGVRVKKEQLFMDEIQELNRKGDIIYQENVELYRKVYGTKDKNGTNRNSVLTDGLGIGEGDESDVPVNLQLSQPQQQHYKAPSGTTKLG 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83218g00001 115 MobiDBLite consensus disorder prediction 65 115 - -
Trme83218g00001 115 ProSiteProfiles K-box domain profile. 1 69 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trme83218g00001 115 MobiDBLite consensus disorder prediction 92 115 - -
Trme83218g00001 115 Pfam K-box region 1 62 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83218g00001 1 104 MADS-box Gene Family AT3G57230 50.000 1.20e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83218g00001 K09264 - gmx:100812413 178.333