Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme831g00001 ATGCCTCAGATATCTGCTTTGGGAAGTTCCCATTTCTCAACAACGGCTCAACCATTTTCCAGTAAACGCATTGCTCCGAGGGTTCCGAATCTTATTGGGGGAAGGTTTCTTGACTCAAAATCATCAAATTTCATTGATGTTATAAACCCAGCAACACAAGAAGTTGTGTCACAAGTTCCATTGTCTACAGATGAAGAGTTTAAAGCTGCTGTATCTGCAGCAAAGAAGGCATTTCCATCATGGCGTAACACTCCAGTTACGACACGTCAACGTGTTATGTTGAAGCTCCAGGAGCTCATACGCAGAGATATGGATAAACTCGCTCTTAATGTGACCACCGAACAAGGAAAGACACTGAAGGATGCACAAGGAGATGTGTTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGGAACTCTACAAATGGGGGAGTATGTTTCGAATGTATCTAATGGAGTCGACACCTACAGCGTTAGAGAACCGATTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCCTTGGCTGTTACCTGCGGCAATACCTTTGTTCTAAAACCGTCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAGTTGGCATTGGAGGCTGGTTTACCTGAGGGTGTCTTAAATATTGTTCATGGAACCCATGCTGGAATGCACATATATTCAAGAGCAGCTGCTAAAGGGAAACGTGTTCAG 741 0.4453 MPQISALGSSHFSTTAQPFSSKRIAPRVPNLIGGRFLDSKSSNFIDVINPATQEVVSQVPLSTDEEFKAAVSAAKKAFPSWRNTPVTTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMGTLQMGEYVSNVSNGVDTYSVREPIGVCAGICPFNFPAMIPLWMFPLAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHAGMHIYSRAAAKGKRVQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme831g00001 247 SUPERFAMILY ALDH-like 21 246 IPR016161 GO:0016491
Trme831g00001 247 Pfam Aldehyde dehydrogenase family 38 231 IPR015590 GO:0016491
Trme831g00001 247 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 19 247 IPR016162 GO:0016491
Trme831g00001 247 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 32 232 - -
Trme831g00001 247 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 3 247 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme831g00001 Trme-Chr831 9 3292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme831g00001 2 247 Aldehyde Dehydrogenase Gene Family AT2G14170 73.881 1.98e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme831g00001 K00140 - gmx:100791508 425.246