Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme83176g00001 ATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATCCAATTTGTGATTGGAAAGCGCTTCTACATAGCAGCTATCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACGGCATCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACGTTTGTATTGTTGGGCAAATATTTGGAATGTCTTGCCAAAGGAAAGACATCTGATGCCATTAAGAAGTTAGTAGAACTCACTCCTGCAACAGCTCTGTTGGTTGTTAAAGACAAAGATGGTAAATCTATTGAAGAAAGAGAAATAGATTCTCTGCTTATTCAACCTAGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCCGCTGATG 442 0.3891 MDDWLKWALVSVIQFVIGKRFYIAAIRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGKSIEEREIDSLLIQPSDTLKVLPGTKIPAD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme83176g00001 147 PRINTS Copper-transporting ATPase signature 72 91 - -
Trme83176g00001 147 PRINTS Copper-transporting ATPase signature 21 40 - -
Trme83176g00001 147 PRINTS Copper-transporting ATPase signature 92 110 - -
Trme83176g00001 147 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 2 147 - -
Trme83176g00001 147 Gene3D - 90 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme83176g00001 Trme-Chr83176 26 640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme83176g00001 1 147 Primary Pumps ATPases AT5G44790 82.313 5.28e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme83176g00001 K17686 - gmx:100804960 271.937